bionty.BFXPipeline#

class bionty.BFXPipeline(species='all', source=None, version=None, **kwargs)#

Bioinformatics pipelines.

Parameters:

species – name of Species entity.
source – The key of the source in the local.yml versions file. Get all available databases with bionty.display_available_versions.
version – The version of the ontology. Typically a date or an actual version. Get available versions with bionty.display_available_versions.

Methods

df()#

DataFrame.